Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825368.1_cds_XP_016502308.1_15969
CDS Infomation

[gene=LOC107820526] [db_xref=GeneID:107820526] [protein=long-chain-alcohol oxidase FAO2-like] [protein_id=XP_016502308.1] [location=complement(join(229643..231388,231610..231882,231978..232196))] [gbkey=CDS]
Sequence

ATGAAGGGAAAACAATGCCATTCTTCATTGAAAGGAGGAAGAATTAGCCGTCCTTATAGC
CATGGCTTCTCTTCTTCTCAAATCCAAACTATTGCTTCCTTTTGTGAAACTCTCATTCCT
CCACTCCCATATGATCCTCAACTTGTATCACCTTTCAATAACAAAGCTCTTGATTCTTTC
TTTTCTTCTTCTGCTTCTCAGCCTCCATTCCCCAATGAGGTTGCAGAGCTACTGGTGAAG
AGAAGCAACCCTGAGGCAATGCTCATAATAAGGATAGTTGTGTTTTTGTTATCAACAAGA
TTAGGGAGTCTTGTGCTTTGTGGACGTGTATGCTTGGATAAGAGATGGCCTTTTGTTCAC
AACTTCTCTGAATTATCCTTAAAGCAAAGAGAACCTCTTCTGCAAAGATGGTCCAGAGAA
AGTTTTCTCCTTCCTCTGAGAATTACTTTCTTATTGATCAAAACTGTGTGTTTATTCATC
TTCTTCTCTTGGACTGATGAAAATTGCAAGAATCCAGCATGGGAAGCAATTGGGTATCAA
CCAGACACAAGACAGACTCCATCTGAAAACCATAAAGAAAGACCACTTGAAAAAGGGATT
GTGGAAACCATAAATGAGAGTGATGAAACTTTGAAAGAATCCTTATCAAAGAAAGGTGTT
CCTCTTACTGAGGATACAAAAGACAACACCTTTAAGATAAGGTGTGATGTTGTGATTGTT
GGTTCTGGATGTGGAGGAGGTGTTGCAGCAGCAATCCTTGCAAAATCAGGTCACAAAGTC
ATCGTGCTCGAGAAAGGTCATTACTTTGTGCCAGAAGATTATTCTGGTCTTGAAGGTCCT
TCAATGAATGAACTGTATGAGACAGGTGCAATGCTTACTACTGATGATGGAAAAGTAATG
GTTATGGCTGGAACGACAGTTGGTGGTGGATCTGCTGTAAACTGGTCTGCTTCCATTAGA
ACTCCAACTGATGTTCTCAATGACTGGTCTGTGAAGCACAAGATTCCATGGTTTGGAACT
TCTGAATATCAGTCTGCCATGGATGCAGTCTGCAAACGGATTGGTGTGACGGAGAATTGC
GCCAACGAAGGACTTCAGAATCAAGCAATACGAAGAGGGTGTGAAAATCTTGGTTTGAAG
GTGGAAAATATACCAAGAAATTCTTCAGAGAATCATTATTGTGGTTCTTGTGGTTATGGT
TGTAAAACAGGAGACAAGAAAGGGACTGATACCACTTGGCTTGTTGATGCTGTTAACGCA
GGCGCCGTTATCTTGACTGGATGCACTGCAGAAAGGTTCATACTGGAAGATGACATGAAT
GAGAAGATATGTATTGGAGTTATTGCGACAACTGAAAGCAAGAAGATCACTAAGAAGCTG
CACATTGAAGCTCGCGCCACGATTTCTTCCTGTGGATCTCTCTTGACACCTCCCTTACTG
ATTTCCAGTGGACTTAAGAACAAGAACATTGGGACAAACCTCCACCTCCACCCTGTTCTT
TTGGCGTGGGGATACTTCCCTGAATCCATGTCTGAAATCAAAGGTAAGAATTATGAGGGA
GGAATAATGACAGCCGTTCATAAGATGGTGCCTGAAGAAACTAATGCACAGGCCATAATA
GAAGCTACAGCTCTGGGACCTGCTTCTTTCGCCTGCTTTTTCCCATGGACTTCTGGGCAG
GATATGAAGGAGAGGATGACAAAGTACTCGCGAACAGCAAATCTGTTAGCATTGGCAAAA
GATCAAGGTTCAGGAGAAGTAAAGAAGGCAGGGAAGATAAAGTACAGACTGGATGAAATT
GATAAAGAGAATATCAAAGCAGGTGTAAGAAGGGCATTGAGGATCCTGGTAGCAGCAGGA
GCTGCTGAAGTGGGAACATATCGAAGTGATGGACAGAAAATCAGTTGTAAAGGGATCACG
AATGAAGAGTTGGAAGAGTTTCTGGACACAGTTGGAGCTACTGGAGGGCCAAGCTCTAAA
GGAGAACAGTGGGCAATCTATGGCTCTGCACATCAAATGGGAAGCTGTCGGATGGGGGCG
AATGAGGAAGATGGAGCAGTGGATGAGAACGGAGAATGCTGGGAAGCAAAAGGCTTATAT
GTATGTGATGGAAGTGTGCTTCCTACAGCAGTTGGTGTCAACCCAATGATCACTATACAG
TCCACTGCTTATTGCATTGCCAATAGAATAGCAGAGTCAATGCATAAGGAAAAGCTAGTT
TCAGACATATGTAAATGA

Peptide Sequence

PEP ID

XP_016502308.1
PEP Infomation

PREDICTED: long-chain-alcohol oxidase FAO2-like [Nicotiana tabacum]
Sequence

MKGKQCHSSLKGGRISRPYSHGFSSSQIQTIASFCETLIPPLPYDPQLVSPFNNKALDSF
FSSSASQPPFPNEVAELLVKRSNPEAMLIIRIVVFLLSTRLGSLVLCGRVCLDKRWPFVH
NFSELSLKQREPLLQRWSRESFLLPLRITFLLIKTVCLFIFFSWTDENCKNPAWEAIGYQ
PDTRQTPSENHKERPLEKGIVETINESDETLKESLSKKGVPLTEDTKDNTFKIRCDVVIV
GSGCGGGVAAAILAKSGHKVIVLEKGHYFVPEDYSGLEGPSMNELYETGAMLTTDDGKVM
VMAGTTVGGGSAVNWSASIRTPTDVLNDWSVKHKIPWFGTSEYQSAMDAVCKRIGVTENC
ANEGLQNQAIRRGCENLGLKVENIPRNSSENHYCGSCGYGCKTGDKKGTDTTWLVDAVNA
GAVILTGCTAERFILEDDMNEKICIGVIATTESKKITKKLHIEARATISSCGSLLTPPLL
ISSGLKNKNIGTNLHLHPVLLAWGYFPESMSEIKGKNYEGGIMTAVHKMVPEETNAQAII
EATALGPASFACFFPWTSGQDMKERMTKYSRTANLLALAKDQGSGEVKKAGKIKYRLDEI
DKENIKAGVRRALRILVAAGAAEVGTYRSDGQKISCKGITNEELEEFLDTVGATGGPSSK
GEQWAIYGSAHQMGSCRMGANEEDGAVDENGECWEAKGLYVCDGSVLPTAVGVNPMITIQ
STAYCIANRIAESMHKEKLVSDICK

Transcript Sequence

Gene sequence data has not been registered.